BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C10LP1|AL425671
(835 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1786 1637 0.0
>3x_Contig1786
Length = 33838
Score = 1637 bits (825), Expect = 0.0
Identities = 832/835 (99%)
Strand = Plus / Minus
Query: 1 tccctcaatccatgctaacagtagagaagcccatgtccccaaattcaagtaggctagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31603 tccctcaatccatgctaacagtagagaagcccatgtccccaaattcaagtaggctagatg 31544
Query: 61 ccgcaagctcagcttcttcatcaggtcctcagtctctacaaagtcccactcctttgcgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31543 ccgcaagctcagcttcttcatcaggtcctcagtctctacaaagtcccactcctttgcgtc 31484
Query: 121 cagtagagttgagacccacctcatctacttcttcgcgtatccccatgattccaaacggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31483 cagtagagttgagacccacctcatctacttcttcgcgtatccccatgattccaaacggga 31424
Query: 181 aggctgaacatccatctgagcaggagcaagattcaaatgcagacgccctctttaacgcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31423 aggctgaacatccatctgagcaggagcaagattcaaatgcagacgccctctttaacgcaa 31364
Query: 241 gcwattctagttataagctatgggtagcccaagcaggtactttgatcgctaatttgctaa 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31363 gcaattctagttataagctatgggtagcccaagcaggtactttgatcgctaatttgctaa 31304
Query: 301 ctacgtccggagcagatcatgttatcactatggatttacatgattctcaattccaaggat 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 31303 ctacgtccggagcagatcatgtcatcactatggatttacatgattctcaattccaaggat 31244
Query: 361 tctttgacattcctgttgataacctatactgtaaacctatcactcaggcttatattcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31243 tctttgacattcctgttgataacctatactgtaaacctatcactcaggcttatattcaac 31184
Query: 421 atcatattcctaactatcaggattgtgtcgttgtttctccagatgctgggggtgctaagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31183 atcatattcctaactatcaggattgtgtcgttgtttctccagatgctgggggtgctaagc 31124
Query: 481 gtgctgcaaaaatcgccgatgtcttagaactttcttttgctatgattcacaaggaaagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31123 gtgctgcaaaaatcgccgatgtcttagaactttcttttgctatgattcacaaggaaagaa 31064
Query: 541 ggtcacagcttttgaaaggtccacctggcgccaccttaacatcaggtggtggcgttccag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31063 ggtcacagcttttgaaaggtccacctggcgccaccttaacatcaggtggtggcgttccag 31004
Query: 601 tatcgaccaaacctttaattgagttactggatattaggacaagtctctccaataatggaa 660
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 31003 tatcgaccaaacctttaattgagtcactggatattaggacaagtctctccaataatggaa 30944
Query: 661 acaataaatacgtgaacactactatgttggtcggtgatgtcagaaacaaagaatgtatta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30943 acaataaatacgtgaacactactatgttggtcggtgatgtcagaaacaaagaatgtatta 30884
Query: 721 ttgttgacgatttggttgacacctcatacaccattactagagcagcaaaactcttgaagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30883 ttgttgacgatttggttgacacctcatacaccattactagagcagcaaaactcttgaagg 30824
Query: 781 accaaggagccactaaaatatatgctttgattacacatggtattttctcaggaga 835
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30823 accaaggagccactaaaatatatgctttgattacacatggtattttctcaggaga 30769
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5254
Number of Sequences: 1807
Number of extensions: 5254
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 835
length of database: 10,358,551
effective HSP length: 16
effective length of query: 819
effective length of database: 10,329,639
effective search space: 8459974341
effective search space used: 8459974341
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)